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Docking: Binding of Complementary Surfaces

students to explore a ligand-protein binding, showing a successful docking. By varying the model, students can discover the two most important factors in molecular recognition: attractive interactions between sites and shape complementarities. For example, if either one of...

molo.concord.org/database/activities/154.html

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Protein Substrate Docking

Learning Objectives This model, using real molecular thermodynamics, shows a docking process, in which one particle is "captured" by another. The user can manipulate the charge and participate in what is a central problem in enzyme catalysis and antigen-antibody inte...

molo.concord.org/database/activities/156.html

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